Skip Main Navigation Links Jump to Footer
Proceedings of the National Academy of Sciences of the United States of AmericaVolume 103, Issue 20, 16 May 2006, Pages 7619-7624

Probing a protein-protein interaction by in vitro evolution(Article)

  • Thom, G.,
  • Cockroft, A.C.,
  • Buchanan, A.G.,
  • Candotti, C.J.,
  • Cohen, E.S.,
  • Lowne, D.,
  • Monk, P.,
  • Shorrock-Hart, C.P.,
  • Jermutus, L.,
  • Minter, R.R.
  • View Correspondence (jump link)
  • Cambridge Antibody Technology, Milstein Building, Granta Park, Cambridge CB1 6GH, United Kingdom

Abstract

In this study, we used in vitro protein evolution with ribosome and phage display to optimize the affinity of a human IL-13-neutralizing antibody, a therapeutic candidate for the treatment of asthma, >150-fold to 81 pM by using affinity-driven stringency selections. Simultaneously, the antibody potency to inhibit IL-13-dependent proliferation in a cell-based functional assay increased 345-fold to an IC50 of 229 pM. The panoply of different optimized sequences resulting from complementarity-determining region-targeted mutagenesis and error-prone PCR using ribosome display was contrasted with that of complementarity-determining region-targeted mutagenesis alone using phage display. The data highlight the advantage of the ribosome-display approach in identifying beneficial mutations across the entire sequence space. A comparison of mutation hotspots from in vitro protein evolution to knockout mutations from alanine scanning demonstrated that in vitro evolution selects the most appropriate positions for improvements in potency without mutating any of the key residues within the functional paratope. © 2006 by The National Academy of Sciences of the USA.

Author keywords

Affinity maturationHuman antibodiesIL-13Protein evolutionRibosome display

Indexed keywords

EMTREE drug terms:interleukin 3neutralizing antibody
EMTREE medical terms:antibody combining sitearticleasthmabinding affinitycell proliferationcomplementarity determining regiongene sequencegene targetinghumanhuman cellIC 50in vitro studymutagenesisphage displaypolymerase chain reactionpriority journalprotein protein interactionribosome
MeSH:Amino Acid SequenceAntibodiesAntibody AffinityCell LineComplementarity Determining RegionsDirected Molecular EvolutionHumansImmunoglobulin GImmunoglobulin Variable RegionInterleukin-13Models, MolecularMutagenesisPeptide LibraryProtein ConformationRibosomes

Chemicals and CAS Registry Numbers:

Antibodies; Complementarity Determining Regions; Immunoglobulin G; Immunoglobulin Variable Region; Interleukin-13; Peptide Library

  • ISSN: 00278424
  • CODEN: PNASA
  • Source Type: Journal
  • Original language: English
  • DOI: 10.1073/pnas.0602341103
  • PubMed ID: 16684878
  • Document Type: Article

  Minter, R.R.; Cambridge Antibody Technology, Milstein Building, Granta Park, United Kingdom;
© Copyright 2008 Elsevier B.V., All rights reserved. © MEDLINE® is the source for the MeSH terms of this document.

Cited by 63 documents

Cochrane, W.G. , Hackler, A.L. , Cavett, V.J.
Integrated, Continuous Emulsion Creamer
(2017) Analytical Chemistry
Popovic, B. , Breed, J. , Rees, D.G.
Structural Characterisation Reveals Mechanism of IL-13-Neutralising Monoclonal Antibody Tralokinumab as Inhibition of Binding to IL-13Rα1 and IL-13Rα2
(2017) Journal of Molecular Biology
Scott, M.J. , Lee, J.A. , Wake, M.S.
‘In-Format’ screening of a novel bispecific antibody format reveals significant potency improvements relative to unformatted molecules
(2017) mAbs
View details of all 63 citations