

Meis1, a conserved transcription factor of the TALE-homeodomain class, is expressed in a wide variety of tissues during development. Its complex expression pattern is likely to be controlled by an equally complex regulatory landscape. Here we have scanned the Meis1 locus for regulatory elements and found 13 non-coding regions, highly conserved between humans and teleost fishes, that have enhancer activity in stable transgenic zebrafish lines. All these regions are syntenic in most vertebrates. The composite expression of all these enhancer elements recapitulate most of Meis1 expression during early embryogenesis, indicating they comprise a basic set of regulatory elements of the Meis1 gene. Using bioinformatic tools, we identify a number of potential binding sites for transcription factors that are compatible with the regulation of these enhancers. Specifically, HHc2:066650, which is expressed in the developing retina and optic tectum, harbors several predicted Pax6 sites. Biochemical, functional and transgenic assays indicate that pax6 genes directly regulate HHc2:066650 activity. © 2012 Royo et al.
| EMTREE drug terms: | transcription factor PAX6eye proteinhomeodomain proteinmyeloid ecotropic viral integration site 1 proteinpaired box transcription factorrepressor proteintranscription factor PAX6tumor protein |
|---|---|
| EMTREE medical terms: | animal tissuearticlebinding sitecontrolled studyembryoembryo developmentenhancer regiongenegene expressiongenetic conservationmeis1 genenonhumannucleotide sequenceoptic tectumPax6 generegulatory mechanismregulatory sequenceretinasyntenyzebra fishanimalantibody specificitybiologychromatin immunoprecipitationeyegene expression regulationgeneticsgrowth, development and aginghumanin situ hybridizationmetabolismprenatal developmenttransgenic animalzebra fish |
| Species Index: | Danio rerioTeleosteiVertebrata |
| MeSH: | AnimalsAnimals, Genetically ModifiedBinding SitesChromatin ImmunoprecipitationComputational BiologyEyeEye ProteinsGene Expression Regulation, DevelopmentalHomeodomain ProteinsHumansIn Situ HybridizationNeoplasm ProteinsOrgan SpecificityPaired Box Transcription FactorsRegulatory Elements, TranscriptionalRepressor ProteinsZebrafish |
GENBANK,
CAA04395(referenced)transcription factor PAX6, 208996-75-2;
Eye Proteins; Homeodomain Proteins; Neoplasm Proteins; PAX6 protein; Paired Box Transcription Factors; Repressor Proteins; myeloid ecotropic viral integration site 1 protein
Gómez-Skarmeta, J. L.; Centro Andaluz de Biología del Desarrollo (CABD) CSIC-UPO-Junta de Anadalucía, Spain;
© Copyright 2012 Elsevier B.V., All rights reserved.