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Biochimica et Biophysica Acta - Gene Regulatory MechanismsVolume 1860, Issue 6, 1 June 2017, Pages 685-694

Expression of Rac1 alternative 3′ UTRs is a cell specific mechanism with a function in dendrite outgrowth in cortical neurons(Article)

  • Braz, S.O.,
  • Cruz, A.,
  • Lobo, A.,
  • Bravo, J.,
  • Moreira-Ribeiro, J.,
  • Pereira-Castro, I.,
  • Freitas, J.,
  • Relvas, J.B.,
  • Summavielle, T.,
  • Moreira, A.
  • View Correspondence (jump link)
  • aGene Regulation Group, IBMC - Instituto de Biologia Celular e Molecular, Porto, Portugal
  • bGlial Cell Biology Group, IBMC - Instituto de Biologia Celular e Molecular, Porto, Portugal
  • cAddiction Biology Group, IBMC - Instituto de Biologia Celular e Molecular, Porto, Portugal
  • dInstituto de Investigação e Inovação em Saúde (i3S), Universidade do Porto, Porto, Portugal
  • eFMUP-Faculdade de Medicina da Universidade do Porto, Portugal
  • fICBAS-Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Portugal

Abstract

The differential expression of mRNAs containing tandem alternative 3′ UTRs, achieved by mechanisms of alternative polyadenylation and post-transcriptional regulation, has been correlated with a variety of cellular states. In differentiated cells and brain tissues there is a general use of distal polyadenylation signals, originating mRNAs with longer 3′ UTRs, in contrast with proliferating cells and other tissues such as testis, where most mRNAs contain shorter 3′ UTRs. Although cell type and state are relevant in many biological processes, how these mechanisms occur in specific brain cell types is still poorly understood. Rac1 is a member of the Rho family of small GTPases with essential roles in multiple cellular processes, including cell differentiation and axonal growth. Here we used different brain cell types and tissues, including oligodendrocytes, microglia, astrocytes, cortical and hippocampal neurons, and optical nerve, to show that classical Rho GTPases express mRNAs with alternative 3′ UTRs differently, by gene- and cell- specific mechanisms. In particular, we show that Rac1 originate mRNA isoforms with longer 3′ UTRs specifically during neurite growth of cortical, but not hippocampal neurons. Furthermore, we demonstrate that the longest Rac1 3′ UTR is necessary for driving the mRNA to the neurites, and also for neurite outgrowth in cortical neurons. Our results indicate that the expression of Rac1 longer 3′ UTR is a gene and cell-type specific mechanism in the brain, with a new physiological function in cortical neuron differentiation. © 2017 Elsevier B.V.

Author keywords

Alternative polyadenylationCortical neuron differentiationNeurite outgrowthRac1

Indexed keywords

EMTREE drug terms:messenger RNAmessenger RNA precursorprotein Cdc42Rac1 proteinRhoA guanine nucleotide binding proteinRNA isoformtranscriptome3' untranslated regionRac1 proteinRac1 protein, rat
EMTREE medical terms:3' untranslated regionanimal cellanimal experimentanimal tissueArticleastrocytebrain cellcell culturecell differentiationcell populationcellular distributioncontrolled studydendritehippocampushumanhuman cellhuman tissuein vitro studyin vivo studymicroglianerve growthneurite outgrowthnonhumanoligodendrogliaoptic nervepolyadenylationpriority journalprotein expressionprotein localizationratsignal transduction3' untranslated regionanimalbiosynthesisbrain cortexcytologyenzymologygene expression regulationgeneticsneuritephysiologyWistar rat
MeSH:3' Untranslated RegionsAnimalsCell DifferentiationCells, CulturedCerebral CortexGene Expression Regulation, EnzymologicHumansNeuritesrac1 GTP-Binding ProteinRatsRats, Wistar

Chemicals and CAS Registry Numbers:

3' Untranslated Regions; rac1 GTP-Binding Protein; Rac1 protein, rat

  • ISSN: 18749399
  • Source Type: Journal
  • Original language: English
  • DOI: 10.1016/j.bbagrm.2017.03.002
  • PubMed ID: 28274785
  • Document Type: Article
  • Publisher: Elsevier B.V.

  Relvas, J.B.; Glial Cell Biology Group, IBMC - Instituto de Biologia Celular e Molecular, Instituto de Investigação e Inovação em Saúde (i3S), Universidade do Porto, Porto, Portugal;
© Copyright 2017 Elsevier B.V., All rights reserved.

Cited by 1 document

Grassi, E. , Santoro, R. , Umbach, A.
Choice of alternative polyadenylation sites, mediated by the rna-binding protein Elavl3, plays a role in differentiation of inhibitory neuronal progenitors
(2019) Frontiers in Cellular Neuroscience
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